Basic Statistics
Measure | Value |
---|---|
Filename | Control_R1_S14_L008_R1_001_x.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 500000 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGAATC | 46865 | 0.0 | 45.344223 | 1 |
CTAATCT | 20 | 7.8699016E-4 | 43.979893 | 2 |
AGTTTCG | 20 | 7.8776595E-4 | 43.971096 | 39 |
TGACCGG | 20 | 7.8776595E-4 | 43.971096 | 44 |
AGTACGG | 20 | 7.8776595E-4 | 43.971096 | 44 |
TGTGGGA | 25 | 4.456473E-5 | 43.971092 | 9 |
TTTTGGA | 50 | 2.7284841E-11 | 43.971092 | 8 |
CCTATAG | 25 | 4.456473E-5 | 43.971092 | 44 |
CGGAAAT | 20 | 7.88154E-4 | 43.9667 | 28 |
ACACGTA | 20 | 7.88154E-4 | 43.9667 | 33 |
CGCGGAA | 45 | 4.820322E-10 | 43.9667 | 28 |
CCGGAAT | 125 | 0.0 | 43.9667 | 27 |
CGGGGAT | 35 | 1.4524994E-7 | 43.9667 | 28 |
GGGACTA | 20 | 7.88154E-4 | 43.9667 | 29 |
CGGGACA | 65 | 0.0 | 43.9667 | 28 |
GCGGAGG | 20 | 7.88154E-4 | 43.9667 | 29 |
CGCGTAT | 20 | 7.88154E-4 | 43.9667 | 28 |
GATAGCT | 20 | 7.88154E-4 | 43.9667 | 29 |
CGTTGGG | 30 | 2.5380232E-6 | 43.966698 | 28 |
CGTACTA | 25 | 4.4591052E-5 | 43.966698 | 28 |